CellProfiler


New CellProfiler Modules Have ideas or already written new modules for CellProfiler 2.0?
CellProfiler Help All questions related to CellProfiler 2.0 may be directed here.
CPCluster Help Questions about cluster computing with CellProfiler 2.0 and CPCluster 2.0.
CellProfiler Bugs Report or discuss all CellProfiler 2.0 bugs here.

Quick survey for any and all image users [CellProfiler] (2)
Before Posting: Tips [CellProfiler] (2)
Welcome to the CellProfiler forum! [CellProfiler] (2)
About the CellProfiler category [CellProfiler] (1)
CellProfiler 3.0.0 installation issues ( 2 3 ) [CellProfiler Bugs] (40)
Value Error: The truth value of any array with more than one element is ambiguous [CellProfiler Help] (2)
Calculated size is different from that of image J [CellProfiler Help] (2)
Loading images via hyperlink [CellProfiler] (4)
Different number of cells on Mac vs PC (CP2.2.0) [CellProfiler Bugs] (2)
Can't get CellProfiler run on Ubuntu [CellProfiler] (2)
Help with counting osteoclasts [CellProfiler] (13)
Measuring dapi intensity on neun positive cells [CellProfiler Help] (7)
Segmentation with nuclei and not so great membrane staining [CellProfiler] (1)
Pipelines for analyzing BBBC021 data set [CellProfiler Bugs] (5)
Save images to different folders depending on class label? [CellProfiler] (8)
Only Resize works while Processing as 3D, error for the rest [CellProfiler Bugs] (3)
CP3: Using DisplayDataOnImage with a value calculated in CalculateMath [CellProfiler] (2)
Does headless mode use multiple cores in v 3.0? [CPCluster Help] (4)
Problem Initiating Cellprofiler headless [CellProfiler Bugs] (3)
Secondary objects AreaShape_Area vs. Primary objects AreaShape_Area [CellProfiler Help] (2)
Nucleolus Pipeline Problems [CellProfiler Help] (2)
Error when trying to save classes for each object in database [CellProfiler Bugs] (2)
GC overhead with 2.2.1 [CellProfiler Bugs] (5)
Measure Neurons - Total Neuron Length Measurement [CellProfiler Help] (5)
Trouble getting started [CellProfiler Help] (6)
IdentifyPrimaryObjects Threshold per object [CellProfiler] (4)
Threshold smoothing scale [CellProfiler] (2)
RadialCV explanation [CellProfiler Help] (3)
Filter by Intensity [CellProfiler Help] (2)
Merging brightfield and fluorescent channels to create a composite image [CellProfiler Help] (3)