CellProfiler not handling montage/ stitched images

stitched
montage
error

#1

Hi,
I used the pipeline shown: cpproj1.cpproj (638.5 KB)

I used it with two (or more) stitched .tif images and received the following errors:
(received the bottom error first)

I clicked on continue processing each time, but the project gets stuck in ‘post processing’ forever (16 hours and counting…)

It works fine when I use unstitched images, but that’s not suitable for my workflow.


#2

Hi,

Can you check if the 2 images

B1-5_1_1…tif
and
B2-5_1_1…tif

are the same size?

If they are not, can you first make the montage same size first, and try again?


#3

Minh,

Thanks. Indeed, the montages seems to be of different sizes. I’m going to try to make them the same size and see how it goes.