I would be happy to try your suggestion, but I'm stuck on an unrelated problem. I'm unable to compile cellProfiler from source.
I went here: CellProfiler Developer's version installation for Linux
I downloaded the Makefile.CP2:
Then I launched the compilation like that:
make -f Makefile.CP2 PREFIX=/root/soft/cellProfiler/cellProfiler/
I had a lot of outdated libs failling to download. I've updated the Makefile with the correct urls.
Now I'm facing this error:
./xconfig -d s /root/soft/cellProfiler/tmp/ATLAS/x86_64/../ -d b /root/soft/cellProfiler/tmp/ATLAS/x86_64 -Fa alg -fPIC -b 64 -Ss flapack /root/soft/cellProfiler/tmp/lapack-3.3.0/lapack_LINUX.a -Ss pmake 'make -j4' -Si cputhrchk 0
ERROR around arg 19 (cputhrchk).
USAGE: ./xconfig [flags] where flags are:
So I guess I'm not using the correct file/method to build cellProfiler from source and the wiki is maybe outdated.
Please be kind enough to give me any hint to be able to build from source.