I’m trying to run the MeasureObjectNeighbor module on two objects identified via the IdentifyPrimaryObjects. The objects are different cells, and I want to see if they overlap at all. When I try to run the pipeline, I get the following error:
Traceback (most recent call last):
File “cellprofiler\gui\pipelinecontroller.pyc”, line 2826, in do_step
File “cellprofiler\pipeline.pyc”, line 2067, in run_module
File “cellprofiler\modules\measureobjectneighbors.pyc”, line 431, in run
IndexError: index 23 is out of bounds for axis 1 with size 23
I’m running Windows 10 Pro, CellProfiler rev ac0529e. I read the old posts regarding similar issues and saw that most of them said the issue has been fixed via an updated CP. Since the CP i’m running is about 2 years newer than the ones mentioned in the previous posts, I thought I’d bring up the issue again. Any help or advice is greatly appreciated. Thanks.