Save Images


#1

Dear cellprofiler users,
I would like to save figures generated by cell profiler during analysis.
The saveimages module asks for module number to do this operation.
Where can I find this number?

Thank you and Kind Regards


#2

Simply count modules from the top of your pipeline to get the module number. For example, if your SaveImages is the fifth module in your pipeline, then enter 5 (in the “Other…” entry). This also corresponds to the figure number, assuming you’re displaying figures.

David


#3

Thank you,
I found out that you can do it only if you save file as .fig…