We’re trying to read neural activation out of a 3D confocal temporal data.
For each time point we have a confocal z-stack of ~40 layers, in two different channels.
We would like to identify objects in one channel and to measure their intensity in the other.
I’ve been playing with some of the pipelines/modules and couldn’t quite understand if CellProcedure supports such 3D operations.
Is there any similar pipleine I can consult with ?
Thanks a lot in advance,