Welcome to the CellProfiler forum!


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Welcome to the CellProfiler forum!

CellProfiler is open-source software for measuring phenotypes in biological images. Get started by searching this forum for answers.

If you don’t find what you need, don’t hesitate to post your question! Be sure to include example images and whatever pipeline you’ve made so far and see the topic “Before Posting: Tips” for proper etiquette.

Please visit the main CellProfiler website to download CellProfiler and access tutorials and example pipelines. Developers may want to visit our Github repository.


Quantify collagen using masson trichrome
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